Banner

Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6009027 chr22:47289785 C/T SFI1 chr22:31884674-32014572:+ -0.51 -6.32 6.03E-10 Box Plot
THCA rs6009027 chr22:47289785 C/T SGSM1 chr22:25202136-25323545:+ -0.53 -6.39 3.97E-10 Box Plot
THCA rs6009027 chr22:47289785 C/T SGSM3 chr22:40766595-40806293:+ -0.63 -8.4 4.95E-16 Box Plot
THCA rs6009027 chr22:47289785 C/T SLC25A17 chr22:41165634-41215403:- -0.65 -7.11 4.13E-12 Box Plot
THCA rs6009027 chr22:47289785 C/T SLC2A11 chr22:24198890-24228496:+ -0.73 -6.76 4.03E-11 Box Plot
THCA rs6009027 chr22:47289785 C/T SMARCB1 chr22:24129150-24176703:+ -0.65 -6.65 7.89E-11 Box Plot
THCA rs6009027 chr22:47289785 C/T SMCR7L chr22:39896105-39914136:+ -0.67 -8.32 8.94E-16 Box Plot
THCA rs6009027 chr22:47289785 C/T SNRPD3 chr22:24951471-25005947:+ -0.74 -8.84 1.81E-17 Box Plot
THCA rs6009027 chr22:47289785 C/T SRRD chr22:26879843-26890624:+ -0.8 -7.77 5.01E-14 Box Plot
THCA rs6009027 chr22:47289785 C/T ST13 chr22:41220539-41253026:- -0.74 -8.37 6.5E-16 Box Plot
THCA rs6009027 chr22:47289785 C/T TAB1 chr22:39795746-39833065:+ -0.86 -8.61 1.03E-16 Box Plot
THCA rs6009027 chr22:47289785 C/T TCF20 chr22:42556019-42739622:- -0.7 -7.73 6.43E-14 Box Plot
THCA rs6009027 chr22:47289785 C/T TFIP11 chr22:26887191-26908471:- -0.81 -7.76 5.02E-14 Box Plot
THCA rs6009027 chr22:47289785 C/T THAP7 chr22:21353393-21356485:- -0.53 -7.57 1.9E-13 Box Plot
THCA rs6009027 chr22:47289785 C/T THOC5 chr22:29901868-29951205:- -0.58 -7.57 1.95E-13 Box Plot